BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. It more published genome-scale metabolic networks into a single database with a set of stardized identifiers called BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites are linked to many external databases (KEGG, PubChem, and many more). This collection references reactions.

Prefix
bigg.reaction
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BiGG Reaction should match this regular expression:
^[a-z_A-Z0-9]+$

Example Local Unique Identifier
13GS   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BiGG Reaction should match this regular expression:
^bigg.reaction:[a-z_A-Z0-9]+$

Example CURIE
bigg.reaction:13GS
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for bigg.reaction.

Registry Name Metaprefix External Prefix
Identifiers.org miriam bigg.reaction
Name-to-Thing n2t bigg.reaction
Prefix Commons prefixcommons BIGG.REACTION
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE bigg.reaction:13GS is used to demonstrate the provides available for bigg.reaction. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BiGG Reaction bigg.reaction http://bigg.ucsd.edu/models/universal/reactions/13GS
Bioregistry bioregistry https://bioregistry.io/bigg.reaction:13GS
Identifiers.org miriam https://identifiers.org/bigg.reaction:13GS
Name-to-Thing n2t https://n2t.net/bigg.reaction:13GS