BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. It more published genome-scale metabolic networks into a single database with a set of stardized identifiers called BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites are linked to many external databases (KEGG, PubChem, and many more). This collection references individual models.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BiGG Model should match this regular expression:

Example Local Unique Identifier
iECABU_c1320   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BiGG Model should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for bigg.model.

Registry Name Metaprefix External Prefix miriam bigg.model
Name-to-Thing n2t bigg.model
Prefix Commons prefixcommons BIGG.MODEL

Providers are various services that resolve CURIEs to URLs. The example CURIE bigg.model:iECABU_c1320 is used to demonstrate the provides available for bigg.model. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BiGG Model bigg.model
Bioregistry bioregistry miriam
Name-to-Thing n2t