BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. It more published genome-scale metabolic networks into a single database with a set of stardized identifiers called BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites are linked to many external databases (KEGG, PubChem, and many more). This collection references model compartments.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BiGG Compartment should match this regular expression:

Example Local Unique Identifier
c   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BiGG Compartment should match this regular expression:

Example CURIE
Metaregistry BiGG Compartment

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext BIGG.COMPARTMENT logo miriam bigg.compartment
N2T Name-to-Thing logo n2t bigg.compartment

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier c is used to demonstrate the providers available for BiGG Compartment. A guide for curating additional providers can be found here.

Name Metaprefix URI
BiGG Compartment bigg.compartment
Bioregistry bioregistry miriam
Name-to-Thing n2t