Bgee is a database of gene expression patterns within particular anatomical structures within a species, and between different animal species. This collection refers to developmental stages.
- Prefix
bgee.stage- Links
- Homepage
- References
- GitHub Issue https://github.com/biopragmatics/bioregistry/issues/889
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in Bgee stage should match this regular expression:
^(FBvd|XtroDO|HsapDO|MmusDO)\:\d+$ - Example Local Unique Identifier
- HsapDO:0000004 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Bgee stage should match this regular expression:
^bgee\.stage:(FBvd|XtroDO|HsapDO|MmusDO)\:\d+$ - Example CURIE
- bgee.stage:HsapDO:0000004
Contacts
- Contact
- Missing Contact
- Contributors
- contributor Sébastien Moretti 0000-0003-3947-488X smoretti
Metaregistry Bgee stage
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
BGEE.STAGE
|
|
Identifiers.org
|
miriam |
bgee.stage
|
|
N2T
|
n2t |
bgee.stage
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier HsapDO:0000004 is used to demonstrate the providers
available for Bgee stage. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.