Bgee is a database to retrieve and compare gene expression patterns in multiple species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data). This collection references genes in Bgee.

gene expression
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Bgee gene should match this regular expression:

Example Local Unique Identifier
FBgn0000015   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Bgee gene should match this regular expression:

Example CURIE
Metaregistry Bgee gene

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for bgee.gene with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext BGEE.GENE logo miriam bgee.gene
Name-to-Thing Name-to-Thing logo n2t bgee.gene
Prefix Commons prefixcommons bgee

Providers are various services that resolve CURIEs to URLs. The example CURIE bgee.gene:FBgn0000015 is used to demonstrate the provides available for bgee.gene. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Bgee gene bgee.gene
Bioregistry bioregistry miriam
Name-to-Thing n2t