BacMap is an electronic, interactive atlas of fully sequenced bacterial genomes. It contains labeled, zoomable and searchable chromosome maps for sequenced prokaryotic (archaebacterial and eubacterial) species. Each map can be zoomed to the level of individual genes and each gene is hyperlinked to a richly annotated gene card. All bacterial genome maps are supplemented with separate prophage genome maps as well as separate tRNA and rRNA maps. Each bacterial chromosome entry in BacMap contains graphs and tables on a variety of gene and protein statistics. Likewise, every bacterial species entry contains a bacterial 'biography' card, with taxonomic details, phenotypic details, textual descriptions and images. This collection references genome map information.
bacmap.map
Local identifiers in BacMap Map should match this
regular expression:
^\w+(\_)?\d+(\.\d+)?$
Compact URIs (CURIEs) constructed from BacMap Map should match
this regular expression:
^bacmap\.map:\w+(\_)?\d+(\.\d+)?$
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
BACMAP.MAP
|
|
Identifiers.org
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miriam |
bacmap.map
|
|
N2T
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n2t |
bacmap.map
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:AP011135
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
BacMap Map | bacmap.map |
http://bacmap.wishartlab.com/maps/AP011135/index.html |
Bioregistry | bioregistry |
https://bioregistry.io/bacmap.map:AP011135 |
Identifiers.org | miriam |
https://identifiers.org/bacmap.map:AP011135 |
Name-to-Thing | n2t |
https://n2t.net/bacmap.map:AP011135 |