A structured controlled vocabulary for the phenotypes of Ascomycete fungi.

Prefix
apo
Preferred Prefix
APO
Keywords
cell biology life cycle stage life science morphology mutation obo ontology phenotype study design
Version
2024-01-08
License
CC-BY-4.0
Links
Homepage Repository OBO OWL @yeastgenome
Contact
Stacia R Engel   0000-0001-5472-917X   srengel
Pattern for Local Unique Identifiers

Local identifiers in Ascomycete phenotype ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000184   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Ascomycete phenotype ontology should match this regular expression:
^APO:\d{7}$

Example CURIE
APO:0000184
Publications
2009 New mutant phenotype data curation system in the Saccharomyces Genome Database
Metaregistry Ascomycete phenotype ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl APO
BioContext biocontext APO
BioPortal BioPortal Prefixes logo bioportal APO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.dyqz3y
OBO Foundry OBO Foundry logo obofoundry apo
OLS Ontology Lookup Service logo ols apo
OntoBee OntoBee logo ontobee APO
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/APO_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE APO:0000184 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Ascomycete phenotype ontology apo http://purl.obolibrary.org/obo/APO_0000184
Ascomycete phenotype ontology (RDF) rdf http://purl.obolibrary.org/obo/APO_0000184
Bioregistry bioregistry https://bioregistry.io/apo:0000184
OBO Foundry obofoundry http://purl.obolibrary.org/obo/APO_0000184
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/apo/terms?iri=http://purl.obolibrary.org/obo/APO_0000184
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/APO/?p=classes&conceptid=http://purl.obolibrary.org/obo/APO_0000184