AceView provides a curated sequence representation of all public mRNA sequences (mRNAs from GenBank or RefSeq, and single pass cDNA sequences from dbEST and Trace). These are aligned on the genome and clustered into a minimal number of alternative transcript variants and grouped into genes. In addition, alternative features such as promoters, and expression in tissues is recorded. This collection references C. elegans genes and expression.
aceview.worm
Local identifiers in Aceview Worm should match this
regular expression:
^[a-z0-9-]+$
Compact URIs (CURIEs) constructed from Aceview Worm should match
this regular expression:
^aceview\.worm:[a-z0-9-]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
ACEVIEW.WORM
|
|
Identifiers.org
![]() |
miriam |
aceview.worm
|
|
N2T
![]() |
n2t |
aceview.worm
|
|
Prefix Commons
|
prefixcommons |
aceview.worm
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:aap-1
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Aceview Worm | aceview.worm |
https://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/av.cgi?db=worm&c=Gene&l=aap-1 |
Bioregistry | bioregistry |
https://bioregistry.io/aceview.worm:aap-1 |
Identifiers.org | miriam |
https://identifiers.org/aceview.worm:aap-1 |
Name-to-Thing | n2t |
https://n2t.net/aceview.worm:aap-1 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/aceview.worm:aap-1 |