PhageDive is a database for bacteriophages and archaeal viruses. It provides information regarding taxonomy, host strain, phage morphology, life cycle, origin and genomic data.
- Prefix
phagedive- Links
- Homepage Request Discussion
- Publications
- 2024 PhageDive: the comprehensive strain database of prokaryotic viral diversity
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in PhageDive should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 3 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from PhageDive should match this regular expression:
^phagedive:\d+$ - Example CURIE
- phagedive:3
Contacts
- Contact
- Johannes Wittmann 0000-0002-7275-9927
- Contributors
- submitter Mufaddal Naguthanawala 0009-0009-5240-7463 nagutm
- Reviewer
- Benjamin M. Gyori 0000-0001-9439-5346 bgyori
Metaregistry PhageDive
The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
re3data
|
re3data |
r3d100014540
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 3 is used to demonstrate the providers
available for PhageDive. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| PhageDive | phagedive |
https://phagedive.dsmz.de/strain/3 |
| Bioregistry | bioregistry |
https://bioregistry.io/phagedive:3 |