The Network Data Exchange (NDEx) is an open-source framework where scientists and organizations can store, share, manipulate, and publish biological network knowledge.
- Prefix
ndex- License
- BSD
- Links
- Homepage
- Publications
- 2021 NDEx: Accessing Network Models and Streamlining Network Biology Workflows
- 2017 NDEx 2.0: A Clearinghouse for Research on Cancer Pathways
- 2017 NDEx: A Community Resource for Sharing and Publishing of Biological Networks
- 2015 NDEx, the Network Data Exchange
Identifier Standards
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- aa78a43f-9c4d-11eb-9e72-0ac135e8bacf Resolve
- Example CURIE
- ndex:aa78a43f-9c4d-11eb-9e72-0ac135e8bacf
Contacts
- Contact
- Missing Contact
- Contributors
-
submitter
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
re3data
|
re3data |
r3d100012690
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier aa78a43f-9c4d-11eb-9e72-0ac135e8bacf is used to demonstrate the providers
available for Network Data Exchange. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Network Data Exchange | ndex |
https://www.ndexbio.org/viewer/networks/aa78a43f-9c4d-11eb-9e72-0ac135e8bacf |
| Bioregistry | bioregistry |
https://bioregistry.io/ndex:aa78a43f-9c4d-11eb-9e72-0ac135e8bacf |