Ontology about C. elegans and other nematode phenotypes

Prefix
wbphenotype
Preferred Prefix
WBPhenotype
Alternative Prefixes
WBPhenotype
Keywords
anatomy life science obo ontology phenotype worm
Version
2024-01-16
License
CC-BY-4.0
Links
Homepage Repository OBO OWL
Contact
Chris Grove   0000-0001-9076-6015   chris-grove
Pattern for Local Unique Identifiers

Local identifiers in C. elegans phenotype should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000983   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from C. elegans phenotype should match this regular expression:
^WBPhenotype:\d{7}$

Example CURIE
WBPhenotype:0000983
Publications
2011 Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community
Metaregistry C. elegans phenotype

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl WBPHENOTYPE
BioContext biocontext WBPhenotype
BioPortal BioPortal Prefixes logo bioportal WB-PHENOTYPE
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.agvc7y
GO Gene Ontology Registry logo go WBPhenotype
OBO Foundry OBO Foundry logo obofoundry wbphenotype
OLS Ontology Lookup Service logo ols wbphenotype
OntoBee OntoBee logo ontobee WBPhenotype
Prefix Commons Prefix Commons logo prefixcommons wbphenotype
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/WBPhenotype_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE WBPhenotype:0000983 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
C. elegans phenotype wbphenotype http://purl.obolibrary.org/obo/WBPhenotype_0000983
C. elegans phenotype (RDF) rdf http://purl.obolibrary.org/obo/WBPhenotype_0000983
Bioregistry bioregistry https://bioregistry.io/wbphenotype:0000983
OBO Foundry obofoundry http://purl.obolibrary.org/obo/WBPhenotype_0000983
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/wbphenotype/terms?iri=http://purl.obolibrary.org/obo/WBPhenotype_0000983
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/WB-PHENOTYPE/?p=classes&conceptid=http://purl.obolibrary.org/obo/WBPhenotype_0000983
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/wbphenotype:0000983