Registry C. elegans development ontology

Ontology about the development and life stages of the C. elegans

Prefix: wbls
Preferred Prefix: WBls
Alternative Prefixes: WBls
Keywords: development developmental biology life cycle life cycle stage life science obo ontology worm
Version: 2024-01-16
License: CC-BY-4.0
Links: Homepage Repository OBO OWL
Contact: Chris Grove 0000-0001-9076-6015 chris-grove
Pattern for Local Unique Identifiers: Local identifiers in C. elegans development ontology should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000690 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from C. elegans development ontology should match this regular expression:
^WBls:\d{7}$
Example CURIE: WBls:0000690
Publications: 2020 WormBase: a modern Model Organism Information Resource

Metaregistry C. elegans development ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 10 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`WBLS`
BioContext	`biocontext`	`WBLS`
Biolink	`biolink`	`WBls`
BioPortal	`bioportal`	`WB-LS`
FAIRSharing	`fairsharing`	`FAIRsharing.sm90nh`
GO	`go`	`WBls`
OBO Foundry	`obofoundry`	`wbls`
OLS	`ols`	`wbls`
OntoBee	`ontobee`	`WBls`
Prefix Commons	`prefixcommons`	`wbls`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/WBls_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE WBls:0000690 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
C. elegans development ontology	`wbls`	http://purl.obolibrary.org/obo/WBls_0000690
C. elegans development ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/WBls_0000690
Bioregistry	`bioregistry`	https://bioregistry.io/wbls:0000690
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/WBls_0000690
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/wbls/terms?iri=http://purl.obolibrary.org/obo/WBls_0000690
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/WB-LS/?p=classes&conceptid=http://purl.obolibrary.org/obo/WBls_0000690

Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code	Name	URL
`bio2rdf`	Bio2RDF	http://bio2rdf.org/wbls:0000690

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("WBls")
'wbls'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("wbls")
{'WBls'}

Get the version:

>>> import bioregistry as br
>>> br.get_version("wbls")
'2024-01-16'

Get the license:

>>> import bioregistry as br
>>> br.get_license("wbls")
'CC-BY-4.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("wbls")
'https://github.com/obophenotype/c-elegans-development-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("wbls")
'https://github.com/obophenotype/c-elegans-development-ontology'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("wbls")
'http://purl.obolibrary.org/obo/wbls.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("wbls")
'http://purl.obolibrary.org/obo/wbls.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("wbls")
'Chris Grove'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("wbls")
'cgrove@caltech.edu'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("wbls")
'chris-grove'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("wbls")
'0000-0001-9076-6015'