An ontology covering the taxonomy of teleosts (bony fish)

Prefix
tto
Preferred Prefix
TTO
Keywords
fish life science obo ontology phenotype taxonomic classification
License
CC0-1.0
Links
Homepage Repository OBO OWL
Contact
Jim Balhoff   0000-0002-8688-6599   balhoff
Pattern for Local Unique Identifiers

Local identifiers in Teleost taxonomy ontology should match this regular expression:
^\d+$

Example Local Unique Identifier
1058367   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Teleost taxonomy ontology should match this regular expression:
^TTO:\d+$

Example CURIE
TTO:1058367
Publications
2010 The Teleost Taxonomy Ontology
Metaregistry Teleost taxonomy ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl TTO
BioContext biocontext TTO
BioPortal BioPortal Prefixes logo bioportal TTO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.1rj558
OBO Foundry OBO Foundry logo obofoundry tto
OLS Ontology Lookup Service logo ols tto
OntoBee OntoBee logo ontobee TTO
Prefix Commons Prefix Commons logo prefixcommons tto
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/TTO_$1

Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1058367 is used to demonstrate the providers available for Teleost taxonomy ontology. A guide for curating additional providers can be found here.

Name Metaprefix URI
Teleost taxonomy ontology tto http://purl.obolibrary.org/obo/TTO_1058367
Teleost taxonomy ontology (RDF) rdf http://purl.obolibrary.org/obo/TTO_1058367
Bioregistry bioregistry https://bioregistry.io/tto:1058367
OBO Foundry obofoundry http://purl.obolibrary.org/obo/TTO_1058367
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/tto/terms?iri=http://purl.obolibrary.org/obo/TTO_1058367
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/TTO/?p=classes&conceptid=http://purl.obolibrary.org/obo/TTO_1058367
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/tto:1058367