A biological ontology to standardize and integrate Integrative and Conjugative Element (ICE) information and to support computer-assisted reasoning.

Comment

ICEO is not consistent about its identfiers like ICEO:0000595:1 and ICEO:0000595_1

Prefix

iceo

Preferred Prefix

ICEO

Keywords

obo ontology

Version

2.1

License

CC-BY-4.0

Links

Homepage Repository OWL

Publications

2022 ICEO, a biological ontology for representing and analyzing bacterial integrative and conjugative elements

Pattern for Local Unique Identifiers

Local identifiers in Integrative and Conjugative Element Ontology should match this regular expression:
^\d{7}(_\d)?$

Example Local Unique Identifiers

0000712_1   Resolve
0000712   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Integrative and Conjugative Element Ontology should match this regular expression:
^ICEO:\d{7}(_\d)?$

Example CURIEs

ICEO:0000712_1
ICEO:0000712

Pattern for RDF URIs

http://purl.obolibrary.org/obo/ICEO_$1

Example RDF URI

http://purl.obolibrary.org/obo/ICEO_0000712_1

Contact

Meng LIU   0000-0003-3781-6962   Lemon-Liu

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000712_1 is used to demonstrate the providers available for Integrative and Conjugative Element Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.