Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This collection refers to growth stage ontology information in Gramene.

Prefix

gramene.growthstage

Preferred Prefix

GRO

Alternative Prefixes

cpga gro-cpga

Keywords

anatomy obo ontology

Links

Homepage

Contact

Plant Ontology Administrators

Pattern for Local Unique Identifiers

Local identifiers in Gramene Growth Stage Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0007133   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Gramene Growth Stage Ontology should match this regular expression:
^GRO:\d{7}$

Example CURIE

GRO:0007133

MIRIAM Namespace Embedded in LUI

The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For Gramene Growth Stage Ontology, the banana looks like GRO:. Therefore, you may see local unique identifiers for this resource that look like GRO:0007133 (instead of the canonical form 0007133) and CURIEs for this resource that look like GRO:GRO:0007133 (instead of the canonical form GRO:0007133). The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/GRO_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0007133 is used to demonstrate the providers available for Gramene Growth Stage Ontology. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.