MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and concentrations, and experimental data from metabolic experiments. This collection references individual metabolomics studies.

Prefix
metabolights
Keywords
bibliography/documents chemical structure metabolite method
License
Apache License 2.0
Links
Homepage
Publications
https://bioregistry.io/pubmed:28830114
https://bioregistry.io/pubmed:27010336
https://bioregistry.io/pubmed:23683662
https://bioregistry.io/pubmed:23630246
https://bioregistry.io/pubmed:23109552
https://bioregistry.io/pubmed:23060735
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in MetaboLights Compound should match this regular expression:
^MTBL[CS]\d+$

Example Local Unique Identifier
MTBLS1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MetaboLights Compound should match this regular expression:
^metabolights:MTBL[CS]\d+$

Example CURIE
metabolights:MTBLS1
Contacts
Contact
Missing Contact
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection (1)
Synapse.org external links
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 7 mappings to external registries with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext METABOLIGHTS
Cellosaurus Cellosaurus Registry logo cellosaurus MetaboLights
Integbio Integbio logo integbio nbdc02124
Identifiers.org Identifiers.org logo miriam metabolights
N2T Name-to-Thing logo n2t metabolights
re3data Registry of Research Data Repositories logo re3data r3d100011556
Wikidata Wikidata Property logo wikidata P3890
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MTBLS1 is used to demonstrate the providers available for MetaboLights Compound. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
MetaboLights Compound metabolights https://www.ebi.ac.uk/metabolights/MTBLS1
Bioregistry bioregistry https://bioregistry.io/metabolights:MTBLS1
Identifiers.org miriam https://identifiers.org/metabolights:MTBLS1
Name-to-Thing n2t https://n2t.net/metabolights:MTBLS1
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
MataboLights through OmicsDI omicsdi https://www.omicsdi.org/dataset/metabolights_dataset/MTBLS1