MedGen is a portal for information about conditions and phenotypes related to Medical Genetics. Terms from multiple sources are aggregated into concepts, each of which is assigned a unique identifier and a preferred name and symbol. The core content of the record may include names, identifiers used by other databases, mode of inheritance, clinical features, and map location of the loci affecting the disorder.
medgen
Local identifiers in MedGen should match this
regular expression:
^(CN)?\d{2,7}$
Compact URIs (CURIEs) constructed from MedGen should match
this regular expression:
^medgen:(CN)?\d{2,7}$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 7 mappings to external registries with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
MedGen
|
|
|
Biolink
|
biolink |
medgen
|
|
Integbio
|
integbio |
nbdc02560
|
|
Identifiers.org
|
miriam |
medgen
|
|
N2T
|
n2t |
medgen
|
|
|
NCBI
|
ncbi |
MedGen
|
|
| TogoID | togoid |
Medgen
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 760050 is used to demonstrate the providers
available for MedGen. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| MedGen | medgen |
https://www.ncbi.nlm.nih.gov/medgen/760050 |
| Bioregistry | bioregistry |
https://bioregistry.io/medgen:760050 |
| Identifiers.org | miriam |
https://identifiers.org/medgen:760050 |
| Name-to-Thing | n2t |
https://n2t.net/medgen:760050 |