Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in Japan Collection of Microorganisms should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 17254 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Japan Collection of Microorganisms should match this regular expression:
^jcm:\d+$ - Example CURIE
- jcm:17254
Contacts
- Contact
- Missing Contact
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 5 mappings to external registries with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
JCM
|
|
Identifiers.org
|
miriam |
jcm
|
|
N2T
|
n2t |
jcm
|
|
NCBI
|
ncbi |
JCM
|
|
Prefix Commons
|
prefixcommons |
jcm
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 17254 is used to demonstrate the providers
available for Japan Collection of Microorganisms. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Japan Collection of Microorganisms | jcm |
http://www.jcm.riken.go.jp/cgi-bin/jcm/jcm_number?JCM=17254 |
| Bioregistry | bioregistry |
https://bioregistry.io/jcm:17254 |
| Identifiers.org | miriam |
https://identifiers.org/jcm:17254 |
| Name-to-Thing | n2t |
https://n2t.net/jcm:17254 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/jcm:17254 |