Registry Interaction Network Ontology

he Interaction Network Ontology (INO) is an ontology in the domain of interactions and interaction networks. INO represents general and species-neutral types of interactions and interaction networks, and their related elements and relations. INO is a community-driven ontology, aligns with BFO, and is developed by following the OBO Foundry principles.

Prefix

ino

Preferred Prefix

INO

Keywords

life science molecular interaction network model obo ontology

Version

1.1.13

License

CC-BY-3.0

Links

Homepage Repository OWL

Contact

Yongqun Oliver He 0000-0001-9189-9661 yongqunh

Pattern for Local Unique Identifiers

Local identifiers in Interaction Network Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0000003 Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Interaction Network Ontology should match this regular expression:
^INO:\d{7}$

Example CURIE

INO:0000003

Publications

Metaregistry Interaction Network Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`INO`
Biolink	`biolink`	`INO`
BioPortal	`bioportal`	`INO`
FAIRSharing	`fairsharing`	`FAIRsharing.mm72as`
OBO Foundry	`obofoundry`	`ino`
OLS	`ols`	`ino`
OntoBee	`ontobee`	`INO`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/INO_$1

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000003 is used to demonstrate the providers available for Interaction Network Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Interaction Network Ontology	`ino`	http://purl.obolibrary.org/obo/INO_0000003
Interaction Network Ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/INO_0000003
Bioregistry	`bioregistry`	https://bioregistry.io/ino:0000003
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/INO_0000003
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/ino/terms?iri=http://purl.obolibrary.org/obo/INO_0000003
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/INO/?p=classes&conceptid=http://purl.obolibrary.org/obo/INO_0000003

Get the version:

>>> import bioregistry as br
>>> br.get_version("ino")
'1.1.13'

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("ino")
'Interaction Network Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("ino")
'CC-BY-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("ino")
'https://github.com/INO-ontology/ino'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("ino")
'https://github.com/INO-ontology/ino'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("ino")
'http://purl.obolibrary.org/obo/ino.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("ino")
'Yongqun Oliver He'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("ino")
'yongqunh@med.umich.edu'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("ino")
'yongqunh'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("ino")
'0000-0001-9189-9661'