HomoloGene is a system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes.

Prefix
homologene
Keywords
gene genome life science
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in HomoloGene should match this regular expression:
^\d+$

Example Local Unique Identifier
1000   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from HomoloGene should match this regular expression:
^homologene:\d+$

Example CURIE
homologene:1000
Publications
2010 Database resources of the National Center for Biotechnology Information
Metaregistry HomoloGene

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext HOMOLOGENE
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.mzc066
Integbio Integbio logo integbio nbdc00101
Identifiers.org Identifiers.org logo miriam homologene
N2T Name-to-Thing logo n2t homologene
Prefix Commons Prefix Commons logo prefixcommons homologene
TogoID togoid Homologene
Wikidata Wikidata Property logo wikidata P593
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1000 is used to demonstrate the providers available for HomoloGene. A guide for curating additional providers can be found here.

Name Metaprefix URI
HomoloGene homologene https://www.ncbi.nlm.nih.gov/homologene/1000
Bioregistry bioregistry https://bioregistry.io/homologene:1000
Identifiers.org miriam https://identifiers.org/homologene:1000
Name-to-Thing n2t https://n2t.net/homologene:1000
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
CURATOR_REVIEW Bio2RDF http://homologene.bio2rdf.org/describe/?url=http://bio2rdf.org/homologene:1000
bio2rdf Bio2RDF http://bio2rdf.org/homologene:1000