Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome.
genprop
Local identifiers in Genome Properties should match this
regular expression:
^GenProp\d+$
Compact URIs (CURIEs) constructed from Genome Properties should match
this regular expression:
^genprop:GenProp\d+$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 4 mappings to external registries with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
GENPROP
|
|
Identifiers.org
|
miriam |
genprop
|
|
N2T
|
n2t |
genprop
|
|
|
Prefix Commons
|
prefixcommons |
jcvi.genprop
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier GenProp0699 is used to demonstrate the providers
available for Genome Properties. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Genome Properties | genprop |
https://www.ebi.ac.uk/interpro/genomeproperties/#GenProp0699 |
| Bioregistry | bioregistry |
https://bioregistry.io/genprop:GenProp0699 |
| Identifiers.org | miriam |
https://identifiers.org/genprop:GenProp0699 |
| Name-to-Thing | n2t |
https://n2t.net/genprop:GenProp0699 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/jcvi.genprop:GenProp0699 |