Registry The Ecosystem Ontology

DataONE ontology of Carbon Flux measurements for MsTMIP and LTER Use Cases

Prefix: ecso
Keywords: earth science ecosystem ecosystem science ontology
Links: Homepage Repository OWL
Contact: Bryce Mecum 0000-0002-0381-3766 amoeba
Pattern for Local Unique Identifiers: Local identifiers in The Ecosystem Ontology should match this regular expression:
^\d+$
Example Local Unique Identifier: 00000532 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from The Ecosystem Ontology should match this regular expression:
^ecso:\d+$
Example CURIE: ecso:00000532

Metaregistry The Ecosystem Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`ECSO`
BioPortal	`bioportal`	`ECSO`
EcoPortal	`ecoportal`	`ECSO`
FAIRSharing	`fairsharing`	`FAIRsharing.a4ww64`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 00000532 is used to demonstrate the providers available for The Ecosystem Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
The Ecosystem Ontology	`ecso`	http://purl.dataone.org/odo/ECSO_00000532
Bioregistry	`bioregistry`	https://bioregistry.io/ecso:00000532

This name annotation was originally annotated in BioPortal Prefixes and is redistributed under the See https://github.com/biopragmatics/bioregistry/issues/337 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("ecso")
'The Ecosystem Ontology'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("ecso")
'http://bioportal.bioontology.org/ontologies/ECSO'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("ecso")
'https://github.com/DataONEorg/sem-prov-ontologies'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("ecso")
'https://raw.githubusercontent.com/DataONEorg/sem-prov-ontologies/run4/observation/d1-ECSO.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("ecso")
'Bryce Mecum'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("ecso")
'brycemecum@gmail.com'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("ecso")
'amoeba'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("ecso")
'0000-0002-0381-3766'