DASHR reports the annotation, expression and evidence for specific RNA processing (cleavage specificity scores/entropy) of human sncRNA genes, precursor and mature sncRNA products across different human tissues and cell types. DASHR integrates information from multiple existing annotation resources for small non-coding RNAs, including microRNAs (miRNAs), Piwi-interacting (piRNAs), small nuclear (snRNAs), nucleolar (snoRNAs), cytoplasmic (scRNAs), transfer (tRNAs), tRNA fragments (tRFs), and ribosomal RNAs (rRNAs). These datasets were obtained from non-diseased human tissues and cell types and were generated for studying or profiling small non-coding RNAs. This collection references RNA records.

Prefix
dashr
Keywords
life science
Links
Homepage
Contact
Li-San Wang   0000-0002-3684-0031
Pattern for Local Unique Identifiers

Local identifiers in Database of small human noncoding RNAs should match this regular expression:
^(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$

Example Local Unique Identifier
hsa-mir-200a   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Database of small human noncoding RNAs should match this regular expression:
^dashr:(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$

Example CURIE
dashr:hsa-mir-200a
Publications
2015 DASHR: database of small human noncoding RNAs
Metaregistry Database of small human noncoding RNAs

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext DASHR
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.ztvs34
Identifiers.org Identifiers.org logo miriam dashr
N2T Name-to-Thing logo n2t dashr
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE dashr:hsa-mir-200a is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Database of small human noncoding RNAs dashr http://lisanwanglab.org/DASHR/entry/hsa-mir-200a
Bioregistry bioregistry https://bioregistry.io/dashr:hsa-mir-200a
Identifiers.org miriam https://identifiers.org/dashr:hsa-mir-200a
Name-to-Thing n2t https://n2t.net/dashr:hsa-mir-200a