The Cell Cycle Ontology is an application ontology that captures and integrates detailed knowledge on the cell cycle process.

Prefix

cco

Keywords

cell cell cycle functional genomics genomics life science molecular function obo ontology proteomics

Links

Homepage OBO OWL

Contact

Martin Kuiper   0000-0002-1171-9876   makuintnu

Pattern for Local Unique Identifiers

Local identifiers in Cell Cycle Ontology should match this regular expression:
^\w+$

Example Local Unique Identifier

0000003   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Cell Cycle Ontology should match this regular expression:
^cco:\w+$

Example CURIE

cco:0000003

MIRIAM Namespace Embedded in LUI

The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For Cell Cycle Ontology, the banana looks like CCO:. Therefore, you may see local unique identifiers for this resource that look like CCO:0000003 (instead of the canonical form 0000003) and CURIEs for this resource that look like cco:CCO:0000003 (instead of the canonical form cco:0000003). The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.

Publications

2009 The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000003 is used to demonstrate the providers available for Cell Cycle Ontology. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.