The Barcode of Life Data System (BOLD) is an informatics workbench aiding the acquisition, storage, analysis and publication of DNA barcode records. The associated taxonomy browser shows the progress of DNA barcoding and provides sample collection site distribution, and taxon occurence information.
- Prefix
bold.taxonomy- Keywords
- dna
- Links
- Homepage
- Publications
- 2007 bold: The Barcode of Life Data System (http://www.barcodinglife.org)
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in BOLD Systems taxon should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 27267 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from BOLD Systems taxon should match this regular expression:
^bold\.taxonomy:\d+$ - Example CURIE
- bold.taxonomy:27267
Contacts
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
BOLD.TAXONOMY
|
|
Identifiers.org
|
miriam |
bold.taxonomy
|
|
N2T
|
n2t |
bold.taxonomy
|
|
NCBI
|
ncbi |
BOLD
|
|
Prefix Commons
|
prefixcommons |
bold
|
|
Wikidata
|
wikidata |
P3606
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 27267 is used to demonstrate the providers
available for BOLD Systems taxon. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| BOLD Systems taxon | bold.taxonomy |
http://www.boldsystems.org/index.php/Taxbrowser_Taxonpage?taxid=27267 |
| Bioregistry | bioregistry |
https://bioregistry.io/bold.taxonomy:27267 |
| Identifiers.org | miriam |
https://identifiers.org/bold.taxonomy:27267 |
| Name-to-Thing | n2t |
https://n2t.net/bold.taxonomy:27267 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/bold:27267 |