The BIRN Project lexicon will provide entities for data and database annotation for the BIRN project, covering anatomy, disease, data collection, project management and experimental design.
Part of the NeuroLex namespace now
birnlex
Local identifiers in Biomedical Informatics Research Network Lexicon should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Biomedical Informatics Research Network Lexicon should match
this regular expression:
^birnlex:\d+$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
AberOWL
|
aberowl |
BIRNLEX
|
|
BioPortal
|
bioportal |
BIRNLEX
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.jedbbt
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 2023 is used to demonstrate the providers
available for Biomedical Informatics Research Network Lexicon. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Biomedical Informatics Research Network Lexicon | birnlex |
http://uri.neuinfo.org/nif/nifstd/birnlex_2023 |
| Bioregistry | bioregistry |
https://bioregistry.io/birnlex:2023 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| BioPortal | bioportal.purl |
http://bioontology.org/projects/ontologies/birnlex#2023 |