BioSimulations is an open repository of simulation projects, including simulation experiments, their results, and data visualizations of their results. BioSimulations supports a broad range of model languages, modeling frameworks, simulation algorithms, and simulation software tools.
biosimulations
Local identifiers in biosimulations should match this
regular expression:
^[a-zA-Z0-9_-]{3,}$
Compact URIs (CURIEs) constructed from biosimulations should match
this regular expression:
^biosimulations:[a-zA-Z0-9_-]{3,}$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 2 mappings to external registries with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Identifiers.org
|
miriam |
biosimulations
|
|
re3data
|
re3data |
r3d100013361
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier Yeast-cell-cycle-Irons-J-Theor-Biol-2009 is used to demonstrate the providers
available for biosimulations. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| biosimulations | biosimulations |
https://biosimulations.org/projects/Yeast-cell-cycle-Irons-J-Theor-Biol-2009 |
| Bioregistry | bioregistry |
https://bioregistry.io/biosimulations:Yeast-cell-cycle-Irons-J-Theor-Biol-2009 |
| Identifiers.org | miriam |
https://identifiers.org/biosimulations:Yeast-cell-cycle-Irons-J-Theor-Biol-2009 |