BioProject provides an organizational framework to access metadata about research projects and the data from the projects that are deposited into different databases. It provides information about a project’s scope, material, objectives, funding source and general relevance categories.
bioproject
Local identifiers in BioProject should match this
regular expression:
^PRJ[DEN][A-Z]\d+$
Compact URIs (CURIEs) constructed from BioProject should match
this regular expression:
^bioproject:PRJ[DEN][A-Z]\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
BIOPROJECT
|
|
FAIRSharing | fairsharing |
FAIRsharing.aqhv1y
|
|
Identifiers.org | miriam |
bioproject
|
|
N2T | n2t |
bioproject
|
|
re3data | re3data |
r3d100013330
|
|
TogoID | togoid |
Bioproject
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier PRJDB3
is used to demonstrate the providers
available for BioProject. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
BioProject | bioproject |
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJDB3 |
Bioregistry | bioregistry |
https://bioregistry.io/bioproject:PRJDB3 |
Identifiers.org | miriam |
https://identifiers.org/bioproject:PRJDB3 |
Name-to-Thing | n2t |
https://n2t.net/bioproject:PRJDB3 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW |
BioProject at DNA Data Bank of Japan | http://trace.ddbj.nig.ac.jp/BPSearch/bioproject?acc=PRJDB3 |