Vocabulary used in the RDF representation of SBML models.
- Prefix
biomodels.vocabulary- Links
- Homepage
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in SBML RDF Vocabulary should match this regular expression:
^[A-Za-z]+$ - Example Local Unique Identifier
- rateRule Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from SBML RDF Vocabulary should match this regular expression:
^biomodels\.vocabulary:[A-Za-z]+$ - Example CURIE
- biomodels.vocabulary:rateRule
Contacts
- Contact
- Missing Contact
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
BIOMODELS.VOCABULARY
|
|
Identifiers.org
|
miriam |
biomodels.vocabulary
|
|
N2T
|
n2t |
biomodels.vocabulary
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier rateRule is used to demonstrate the providers
available for SBML RDF Vocabulary. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| SBML RDF Vocabulary | biomodels.vocabulary |
http://biomodels.net/rdf/vocabulary.rdf#rateRule |
| Bioregistry | bioregistry |
https://bioregistry.io/biomodels.vocabulary:rateRule |
| Identifiers.org | miriam |
https://identifiers.org/biomodels.vocabulary:rateRule |
| Name-to-Thing | n2t |
https://n2t.net/biomodels.vocabulary:rateRule |