Registry Scientific Evidence and Provenance Information Ontology

Suggest

An ontology for representing the provenance of scientific claims and the evidence that supports them.

Prefix: sepio
Preferred Prefix: SEPIO
Keywords: mathematics nfdi4chem nfdi4ing obo ontology
Version: 2023-06-13
License: CC-BY-3.0
Links: Homepage Repository OWL
Contact: Matthew Brush 0000-0002-1048-5019 mbrush
Pattern for Local Unique Identifiers: Local identifiers in Scientific Evidence and Provenance Information Ontology should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000048 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Scientific Evidence and Provenance Information Ontology should match this regular expression:
^SEPIO:\d{7}$
Example CURIE: SEPIO:0000048

Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection: NFDI4Chem Collection NFDI4Ing Ontologies

Metaregistry Scientific Evidence and Provenance Information Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`SEPIO`
BioContext	`biocontext`	`SEPIO`
BioPortal	`bioportal`	`SEPIO`
OBO Foundry	`obofoundry`	`sepio`
OLS	`ols`	`sepio`
OntoBee	`ontobee`	`SEPIO`
TIB-TS	`tib`	`sepio`
Wikidata (E)	`wikidata.entity`	`Q55118599`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/SEPIO_$1

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000048 is used to demonstrate the providers available for Scientific Evidence and Provenance Information Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Scientific Evidence and Provenance Information Ontology	`sepio`	http://purl.obolibrary.org/obo/SEPIO_0000048
Scientific Evidence and Provenance Information Ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/SEPIO_0000048
Bioregistry	`bioregistry`	https://bioregistry.io/sepio:0000048
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/SEPIO_0000048
EBI Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/sepio/terms?iri=http://purl.obolibrary.org/obo/SEPIO_0000048
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/SEPIO/?p=classes&conceptid=http://purl.obolibrary.org/obo/SEPIO_0000048

Get the version:

>>> import bioregistry as br
>>> br.get_version("sepio")
'2023-06-13'

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("sepio")
'Scientific Evidence and Provenance Information Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("sepio")
'CC-BY-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("sepio")
'https://github.com/monarch-initiative/SEPIO-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("sepio")
'https://github.com/monarch-initiative/SEPIO-ontology'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("sepio")
'http://purl.obolibrary.org/obo/sepio.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("sepio")
'Matthew Brush'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("sepio")
'mhb120@gmail.com'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("sepio")
'mbrush'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("sepio")
'0000-0002-1048-5019'