Bioregistry JSON Schema

This section describes the JSON schema used Bioregistry. It can be accessed here.

Bioregistry RDF Schema

This section describes the schema used in the RDF dumps of the Bioregistry used with prefix bioregistry.schema and URL https://bioregistry.io/schema/#

C Resource
bioregistry.schema:0000001

A type for entries in the Bioregistry's registry.

C Registry
bioregistry.schema:0000002

A type for entries in the Bioregistry's metaregistry.

C Collection
bioregistry.schema:0000003

A type for entries in the Bioregistry's collections

C Mapping
bioregistry.schema:0000004

A type, typically instantiated as a blank node, that connects a given resource to a metaresource and a metaidentifier using the hasMetaresource and hasMetaidentifier relations.

P hasExample
bioregistry.schema:0000005

An identifier for a resource or metaresource.

P hasProviderFormatter
bioregistry.schema:0000006

The URL format for a provider that contains $1 for the identifier (or metaidentifier) that should be resolved.

P hasResolverFormatter
bioregistry.schema:0000007

The URL format for a resolver that contains $1 for the prefix and $2 for the identifier that should be resolved.

P hasPattern
bioregistry.schema:0000008

The pattern for identifiers in the given resource

P hasContactEmail
bioregistry.schema:0000009

The email of the contact person for the given resource

P hasDownloadURL
bioregistry.schema:0000010

A download link for the given resource

P providesFor
bioregistry.schema:0000011

For resources that do not create their own controlled vocabulary, this relation should be used to point to a different resource that it uses. For example, CTD's gene resource provides for the NCBI Entrez Gene resource.

P isDeprecated
bioregistry.schema:0000012

A property whose subject is a resource that denotes if it is still available and usable? Currently this is a blanket term for decommissioned, unable to locate, abandoned, etc.

P hasMapping
bioregistry.schema:0000013

A property whose subject is a resource and object is a mapping

P hasRegistry
bioregistry.schema:0000014

A property whose subject is a mapping and object is a metaresource.

P hasMetaidentifier
bioregistry.schema:0000015

A property whose subject is a mapping and object is an identifier string.

P hasCanonical
bioregistry.schema:0000016

A property connecting two prefixes that share an IRI where the subject is the non-preferred prefix and the target is the preferred prefix