The REPRODUCE-ME ontology is an extension of the PROV-O and the P-Plan ontology to describe a complete path of a scientific experiment. It expresses the REPRODUCE-ME Data Model using the OWL2 Web Ontology Language (OWL2). It provides a set of classes and properties to represent a scientific experiment including its computational and non-computational steps to track the provenance of results. It describes a complete path of a scientific experiment considering the use-case of biological imaging and microscopy experiments, computational experiments, including Jupyter notebooks and scripts. It describes an experiment and its data, agents, activities, plans, steps, variables, instruments, materials, and settings required for its reproducibility.

Prefix
reproduceme
Version
1.1
Links
Homepage OWL
Contact
sheeba.samuel@uni-jena.de
Pattern
Missing Pattern
Example Identifier
MicrobeamManipulation
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for reproduceme.

Registry Name Metaprefix Metaidentifier
BioPortal Prefixes bioportal REPRODUCE-ME
Ontology Lookup Service ols reproduceme