Pocketome is an encyclopedia of conformational ensembles of all druggable binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. Each Pocketome entry corresponds to a small molecule binding site in a protein which has been co-crystallized in complex with at least one drug-like small molecule, and is represented in at least two PDB entries.

Prefix
pocketome
Links
Homepage
Contact
Missing Contact
Pattern
^[A-Za-z_0-9]+$
Namespace in Pattern
False
Example Identifier
1433C_TOBAC_1_252   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for pocketome.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam pocketome
Name-to-Thing n2t pocketome
Prefix Commons prefixcommons POCKETOME
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE pocketome:1433C_TOBAC_1_252 is used to demonstrate the provides available for pocketome. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
Pocketome pocketome http://www.pocketome.org/files/1433C_TOBAC_1_252.html
Bioregistry bioregistry https://bioregistry.io/pocketome:1433C_TOBAC_1_252
Identifiers.org miriam https://identifiers.org/pocketome:1433C_TOBAC_1_252
Name-to-Thing n2t https://n2t.net/pocketome:1433C_TOBAC_1_252