Registry Database of Escherichia coli Sequence and Function

The EcoGene database contains updated information about the E. coli K-12 genome and proteome sequences, including extensive gene bibliographies. A major EcoGene focus has been the re-evaluation of translation start sites.

Prefix
ecogene
Links
Homepage
Contact
Missing Contact
Pattern
^EG\d+$
Namespace in Pattern
False
Example Identifier
EG10173   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for ecogene.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam ecogene
Name-to-Thing n2t ecogene
National Center for Biotechnology Information Registry ncbi EcoGene
Prefix Commons prefixcommons EcoGene
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ecogene:EG10173 is used to demonstrate the provides available for ecogene. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
Database of Escherichia coli Sequence and Function ecogene http://www.ecogene.org/gene/EG10173
Bioregistry bioregistry https://bioregistry.io/ecogene:EG10173
Identifiers.org miriam https://identifiers.org/ecogene:EG10173
Name-to-Thing n2t https://n2t.net/ecogene:EG10173