DASHR reports the annotation, expression and evidence for specific RNA processing (cleavage specificity scores/entropy) of human sncRNA genes, precursor and mature sncRNA products across different human tissues and cell types. DASHR integrates information from multiple existing annotation resources for small non-coding RNAs, including microRNAs (miRNAs), Piwi-interacting (piRNAs), small nuclear (snRNAs), nucleolar (snoRNAs), cytoplasmic (scRNAs), transfer (tRNAs), tRNA fragments (tRFs), and ribosomal RNAs (rRNAs). These datasets were obtained from non-diseased human tissues and cell types and were generated for studying or profiling small non-coding RNAs. This collection references RNA expression.

Prefix
dashr.expression
Links
Homepage
Contact
Missing Contact
Pattern
^(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$
Namespace in Pattern
False
Example Identifier
hsa-mir-200a   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for dashr.expression.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam dashr.expression
Name-to-Thing n2t dashr.expression
Prefix Commons prefixcommons DASHR.EXPRESSION
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE dashr.expression:hsa-mir-200a is used to demonstrate the provides available for dashr.expression. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
DASHR expression dashr.expression https://dashr1.lisanwanglab.org/entry/hsa-mir-200a#hsa-mir-200a#exprPerTissueTable
Bioregistry bioregistry https://bioregistry.io/dashr.expression:hsa-mir-200a
Identifiers.org miriam https://identifiers.org/dashr.expression:hsa-mir-200a
Name-to-Thing n2t https://n2t.net/dashr.expression:hsa-mir-200a