CAPS-DB is a structural classification of helix-cappings or caps compiled from protein structures. The regions of the polypeptide chain immediately preceding or following an alpha-helix are known as Nt- and Ct cappings, respectively. Caps extracted from protein structures have been structurally classified based on geometry and conformation and organized in a tree-like hierarchical classification where the different levels correspond to different properties of the caps.

Prefix
caps
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in CAPS-DB should match this regular expression:
^\d+$

Example Local Unique Identifier
434   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from CAPS-DB should match this regular expression:
^caps:\d+$

Example CURIE
caps:434
Metaregistry CAPS-DB

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext CAPS
Identifiers.org Identifiers.org logo miriam caps
N2T Name-to-Thing logo n2t caps
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 434 is used to demonstrate the providers available for CAPS-DB. A guide for curating additional providers can be found here.

Name Metaprefix URI
CAPS-DB caps http://www.bioinsilico.org/cgi-bin/CAPSDB/getCAPScluster?nidcl=434
Bioregistry bioregistry https://bioregistry.io/caps:434
Identifiers.org miriam https://identifiers.org/caps:434
Name-to-Thing n2t https://n2t.net/caps:434