The Brenda tissue ontology is a structured controlled vocabulary eastablished to identify the source of an enzyme cited in the Brenda enzyme database. It comprises terms of tissues, cell lines, cell types and cell cultures from uni- and multicellular organisms.
bto
BTO
Local identifiers in BRENDA Tissue Ontology should match this
regular expression:
^\d{7}$
Compact URIs (CURIEs) constructed from BRENDA Tissue Ontology should match
this regular expression:
^BTO:\d{7}$
namespaceEmbeddedInLUI
as true.
This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known
as a banana)
and therefore look like a CURIE. For BRENDA Tissue Ontology, the banana looks like
BTO:
.
Therefore, you may see local unique identifiers for this resource that look like
BTO:0000590
(instead of the canonical form 0000590
) and CURIEs for this resource that look like
BTO:BTO:0000590
(instead of the canonical form BTO:0000590
).
The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 13 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL | aberowl |
BTO
|
|
BioContext | biocontext |
BTO
|
|
BioPortal | bioportal |
BTO
|
|
Cellosaurus | cellosaurus |
BTO
|
|
FAIRSharing | fairsharing |
FAIRsharing.1414v8
|
|
GO | go |
BTO
|
|
Identifiers.org | miriam |
bto
|
|
N2T | n2t |
bto
|
|
OBO Foundry | obofoundry |
bto
|
|
OLS | ols |
bto
|
|
OntoBee | ontobee |
BTO
|
|
Prefix Commons | prefixcommons |
bto
|
|
Wikidata | wikidata |
P5501
|
When using this resource in RDF, the following URI format should be used:
http://purl.obolibrary.org/obo/BTO_$1
Providers are various services that resolve CURIEs to URLs. The example CURIE
BTO:0000590
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/bto:0000590 |
miriam_obo_legacy |
MIRIAM OBO Legacy | http://identifiers.org/obo.bto/BTO:0000590 |