Registry APID Interactomes Provider

APID (Agile Protein Interactomes DataServer) provides information on the protein interactomes of numerous organisms, based on the integration of known experimentally validated protein-protein physical interactions (PPIs). Interactome data includes a report on quality levels and coverage over the proteomes for each organism included. APID integrates PPIs from primary databases of molecular interactions (BIND, BioGRID, DIP, HPRD, IntAct, MINT) and also from experimentally resolved 3D structures (PDB) where more than two distinct proteins have been identified. This collection references protein interactors, through a UniProt identifier.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of apid.interactions.

Missing Contact
^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
Namespace in Pattern
Example Identifier
P01116   Resolve

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for apid.interactions.

Registry Name Metaprefix Metaidentifier miriam apid.interactions
Name-to-Thing n2t apid.interactions
Prefix Commons prefixcommons APID.INTERACTIONS

Providers are various services that resolve CURIEs to URLs. The example CURIE apid.interactions:P01116 is used to demonstrate the provides available for apid.interactions. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
APID Interactomes apid.interactions
Bioregistry bioregistry miriam
Name-to-Thing n2t