Registry Zebrafish anatomy and development ontology

ZFA description.

Prefix
zfa
Preferred Prefix
ZFA
Alternative Prefixes
ZFA_RETIRED
Keywords
anatomy developmental biology life cycle life cycle stage life science morphology obo ontology structure zebrafish
Version
2022-12-09
License
CC-BY-3.0
Links
Homepage Repository OBO OWL OBO JSON
Contact
Ceri Van Slyke   0000-0002-2244-7917   cerivs
Pattern for Local Unique Identifiers

Local identifiers in Zebrafish anatomy and development ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0005926   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Zebrafish anatomy and development ontology should match this regular expression:
^ZFA:\d{7}$

Example CURIE
ZFA:0005926
Publications
2014 The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Appears In (1) (bioregistry.schema:0000018 )
ZP
Metaregistry Zebrafish anatomy and development ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl ZFA
BioContext biocontext ZFA
BioPortal BioPortal Prefixes logo bioportal ZFA
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.s3r6sk
OBO Foundry OBO Foundry logo obofoundry zfa
OLS Ontology Lookup Service logo ols zfa
OntoBee OntoBee logo ontobee ZFA
Prefix Commons Prefix Commons logo prefixcommons zfa
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/ZFA_$1

Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0005926 is used to demonstrate the providers available for Zebrafish anatomy and development ontology. A guide for curating additional providers can be found here.

Name Metaprefix URI
Zebrafish anatomy and development ontology zfa http://purl.obolibrary.org/obo/ZFA_0005926
Zebrafish anatomy and development ontology (RDF) rdf http://purl.obolibrary.org/obo/ZFA_0005926
Bioregistry bioregistry https://bioregistry.io/zfa:0005926
OBO Foundry obofoundry http://purl.obolibrary.org/obo/ZFA_0005926
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/zfa/terms?iri=http://purl.obolibrary.org/obo/ZFA_0005926
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/ZFA/?p=classes&conceptid=http://purl.obolibrary.org/obo/ZFA_0005926
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/zfa:0005926