VIPERdb is a database for icosahedral virus capsid structures . The emphasis of the resource is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the pdb prefix. For all use cases, you should use pdb instead of viperdb.

Prefix
viperdb
Keywords
small molecule structure
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
2c6s   Resolve
Example CURIE
viperdb:2c6s
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Provides
pdb
Metaregistry VIPERdb

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Integbio Integbio logo integbio nbdc00835
Prefix Commons Prefix Commons logo prefixcommons viperdb
re3data Registry of Research Data Repositories logo re3data r3d100012362
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 2c6s is used to demonstrate the providers available for VIPERdb. A guide for curating additional providers can be found here.

Name Metaprefix URI
VIPERdb viperdb https://viperdb.org/Info_Page.php?VDB=2c6s
Bioregistry bioregistry https://bioregistry.io/viperdb:2c6s
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/viperdb:2c6s