The UCSC Genome Browser is an on-line, and downloadable, genome browser hosted by the University of California, Santa Cruz (UCSC).[2][3][4] It is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model organisms, integrated with a large collection of aligned annotations.

Prefix
ucsc
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
uc001rvw.5   Resolve
Example CURIE
ucsc:uc001rvw.5
Publications
2019 The UCSC Genome Browser database: 2019 update
Contributors
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry UCSC Genome Browser

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext UCSC
UniProt UniProt Cross-ref database logo uniprot DB-0139
Wikidata Wikidata Property logo wikidata P2576
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ucsc:uc001rvw.5 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
UCSC Genome Browser ucsc ftp://hgdownload.cse.ucsc.edu/goldenPath/uc001rvw.5
Bioregistry bioregistry https://bioregistry.io/ucsc:uc001rvw.5