The UCSC Genome Browser is an on-line, and downloadable, genome browser hosted by the University of California, Santa Cruz (UCSC).[2][3][4] It is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model organisms, integrated with a large collection of aligned annotations.
ucsc
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
UCSC
|
|
UniProt | uniprot |
DB-0139
|
|
Wikidata | wikidata |
P2576
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
ucsc:uc001rvw.5
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
UCSC Genome Browser | ucsc |
ftp://hgdownload.cse.ucsc.edu/goldenPath/uc001rvw.5 |
Bioregistry | bioregistry |
https://bioregistry.io/ucsc:uc001rvw.5 |