TrichDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Prefix
trichdb
Keywords
genomics
Links
Homepage
Contact
Omar Harb   0000-0003-4446-6200
Pattern for Local Unique Identifiers

Local identifiers in TrichDB should match this regular expression:
^\w+$

Example Local Unique Identifier
TVAG_386080   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from TrichDB should match this regular expression:
^trichdb:\w+$

Example CURIE
trichdb:TVAG_386080
Publications
2008 GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis
Metaregistry TrichDB

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext TRICHDB
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.pv0ezt
Integbio Integbio logo integbio nbdc01785
Identifiers.org Identifiers.org logo miriam trichdb
N2T Name-to-Thing logo n2t trichdb
re3data Registry of Research Data Repositories logo re3data r3d100012461
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier TVAG_386080 is used to demonstrate the providers available for TrichDB. A guide for curating additional providers can be found here.

Name Metaprefix URI
TrichDB trichdb http://trichdb.org/trichdb/showRecord.do?name=GeneRecordClasses.GeneRecordClass&source_id=TVAG_386080
Bioregistry bioregistry https://bioregistry.io/trichdb:TVAG_386080
Identifiers.org miriam https://identifiers.org/trichdb:TVAG_386080
Name-to-Thing n2t https://n2t.net/trichdb:TVAG_386080