TransportDB is a relational database describing the predicted cytoplasmic membrane transport protein complement for organisms whose complete genome sequence are available.
- Prefix
transportdb- Keywords
- protein
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- MMP0523 Resolve
- Example CURIE
- transportdb:MMP0523
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry TransportDB
The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Pathguide
|
pathguide |
105
|
|
Prefix Commons
|
prefixcommons |
transportdb
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier MMP0523 is used to demonstrate the providers
available for TransportDB. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| TransportDB | transportdb |
http://www.membranetransport.org/protein.php?pOID=mmar1&pSynonym=MMP0523 |
| Bioregistry | bioregistry |
https://bioregistry.io/transportdb:MMP0523 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/transportdb:MMP0523 |