SitEx is a database containing information on eukaryotic protein functional sites. It stores the amino acid sequence positions in the functional site, in relation to the exon structure of encoding gene This can be used to detect the exons involved in shuffling in protein evolution, or to design protein-engineering experiments.

Prefix

sitex

Keywords

domain eukaryotic life science sequence structure

Links

Homepage

Contact

Irina Medvedeva   0000-0003-2802-8198   imedvedeva-celgene

Pattern for Local Unique Identifiers

Local identifiers in SitEx should match this regular expression:
^\d+$

Example Local Unique Identifier

1000   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from SitEx should match this regular expression:
^sitex:\d+$

Example CURIE

sitex:1000

Publications

2011 SitEx: a computer system for analysis of projections of protein functional sites on eukaryotic genes

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1000 is used to demonstrate the providers available for SitEx. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.