ScerTF is a database of position weight matrices (PWMs) for transcription factors in Saccharomyces species. It identifies a single matrix for each TF that best predicts in vivo data, providing metrics related to the performance of that matrix in accurately representing the DNA binding specificity of the annotated transcription factor.

Prefix

scretf

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in ScerTF should match this regular expression:
^\w+$

Example Local Unique Identifier

RSC3   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ScerTF should match this regular expression:
^scretf:\w+$

Example CURIE

scretf:RSC3

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier RSC3 is used to demonstrate the providers available for ScerTF. A guide for curating additional providers can be found here.