This website provides genome sequence from the Nipponbare subspecies of rice and annotation of the 12 rice chromosomes. These data are available through search pages and the Genome Browser that provides an integrated display of annotation data.
- Comment
This resource doesn't exist on the web anymore
- Prefix
rgap- Keywords
- dna genome
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- LOC_Os02g13300 Resolve
- Example CURIE
- rgap:LOC_Os02g13300
- Publications
- 2006 The TIGR Rice Genome Annotation Resource: improvements and new features
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry Rice Genome Annotation Project
The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Prefix Commons
|
prefixcommons |
rgap
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier LOC_Os02g13300 is used to demonstrate the providers
available for Rice Genome Annotation Project. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Rice Genome Annotation Project | rgap |
http://rice.plantbiology.msu.edu/cgi-bin/gbrowse/rice/?name=LOC_Os02g13300 |
| Bioregistry | bioregistry |
https://bioregistry.io/rgap:LOC_Os02g13300 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/rgap:LOC_Os02g13300 |