Rice Annotation Project Database (RAP-DB) is a primary rice (Oryza sativa) annotation database established in 2004 upon the completion of the Oryza sativa ssp. japonica cv. Nipponbare genome sequencing by the International Rice Genome Sequencing Project. RAP-DB provides comprehensive resources (e.g. genome annotation, gene expression, DNA markers, genetic diversity, etc.) for biological and agricultural research communities. This collection provides transcript information in RAP-DB.

Prefix
rapdb.transcript
Links
Homepage
Contact
Missing Contact
Pattern
^Os\S+t\d{7}-\d{2}$
Namespace in Pattern
False
Example Identifier
Os01t0883800-02   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for rapdb.transcript.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam rapdb.transcript
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE rapdb.transcript:Os01t0883800-02 is used to demonstrate the provides available for rapdb.transcript. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
RAP-DB Transcript rapdb.transcript https://rapdb.dna.affrc.go.jp/viewer/gene_detail/irgsp1?name=Os01t0883800-02
Bioregistry bioregistry https://bioregistry.io/rapdb.transcript:Os01t0883800-02
Identifiers.org miriam https://identifiers.org/rapdb.transcript:Os01t0883800-02