ProtoNet provides automatic hierarchical classification of protein sequences in the UniProt database, partitioning the protein space into clusters of similar proteins. This collection references protein information.
- Prefix
protonet.proteincard- Keywords
- protein
- Links
- Homepage
- Contact
- Michal Linial 0000-0002-9357-4526 LinialLab
- Pattern for Local Unique Identifiers
-
Local identifiers in ProtoNet ProteinCard should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 16941567 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from ProtoNet ProteinCard should match this regular expression:
^protonet\.proteincard:\d+$ - Example CURIE
- protonet.proteincard:16941567
- Publications
- 2006 Functional annotation prediction: all for one and one for all
Metaregistry ProtoNet ProteinCard
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
PROTONET.PROTEINCARD
|
|
Identifiers.org
|
miriam |
protonet.proteincard
|
|
N2T
|
n2t |
protonet.proteincard
|
|
Prefix Commons
|
prefixcommons |
protonet.proteincard
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 16941567 is used to demonstrate the providers
available for ProtoNet ProteinCard. A guide for curating additional providers can be found
here.
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/protonet.proteincard:16941567 |