ProtoNet provides automatic hierarchical classification of protein sequences in the UniProt database, partitioning the protein space into clusters of similar proteins. This collection references cluster information.
protonet.cluster
Local identifiers in ProtoNet Cluster should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from ProtoNet Cluster should match
this regular expression:
^protonet\.cluster:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PROTONET.CLUSTER
|
|
Identifiers.org | miriam |
protonet.cluster
|
|
N2T | n2t |
protonet.cluster
|
|
Prefix Commons | prefixcommons |
protonet.cluster
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
protonet.cluster:4349895
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
ProtoNet Cluster | protonet.cluster |
http://www.protonet.cs.huji.ac.il/requested/cluster_card.php?cluster=4349895 |
Bioregistry | bioregistry |
https://bioregistry.io/protonet.cluster:4349895 |
Identifiers.org | miriam |
https://identifiers.org/protonet.cluster:4349895 |
Name-to-Thing | n2t |
https://n2t.net/protonet.cluster:4349895 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/protonet.cluster:4349895 |