ProtoNet provides automatic hierarchical classification of protein sequences in the UniProt database, partitioning the protein space into clusters of similar proteins. This collection references cluster information.

Prefix

protonet.cluster

Keywords

classification clustering protein

Links

Homepage

Contact

Michal Linial   0000-0002-9357-4526   LinialLab

Pattern for Local Unique Identifiers

Local identifiers in ProtoNet Cluster should match this regular expression:
^\d+$

Example Local Unique Identifier

4349895   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ProtoNet Cluster should match this regular expression:
^protonet\.cluster:\d+$

Example CURIE

protonet.cluster:4349895

Publications

2006 Functional annotation prediction: all for one and one for all

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 4349895 is used to demonstrate the providers available for ProtoNet Cluster. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.