The Protein Model DataBase (PMDB), is a database that collects manually built three dimensional protein models, obtained by different structure prediction techniques.

Prefix
pmdb
Keywords
protein structural biology structure
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Protein Model Database should match this regular expression:
^PM\d{7}$

Example Local Unique Identifier
PM0012345   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Protein Model Database should match this regular expression:
^pmdb:PM\d{7}$

Example CURIE
pmdb:PM0012345
Publications
2006 The PMDB Protein Model Database
Metaregistry Protein Model Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PMDB
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.wkaakq
Identifiers.org Identifiers.org logo miriam pmdb
N2T Name-to-Thing logo n2t pmdb
Prefix Commons Prefix Commons logo prefixcommons pmdb
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PM0012345 is used to demonstrate the providers available for Protein Model Database. A guide for curating additional providers can be found here.

Name Metaprefix URI
Protein Model Database pmdb https://bioinformatics.cineca.it/PMDB/user//search.php?idsearch=PM0012345
Bioregistry bioregistry https://bioregistry.io/pmdb:PM0012345
Identifiers.org miriam https://identifiers.org/pmdb:PM0012345
Name-to-Thing n2t https://n2t.net/pmdb:PM0012345
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/pmdb:PM0012345