The Protein Model DataBase (PMDB), is a database that collects manually built three dimensional protein models, obtained by different structure prediction techniques.
pmdb
Local identifiers in Protein Model Database should match this
regular expression:
^PM\d{7}$
Compact URIs (CURIEs) constructed from Protein Model Database should match
this regular expression:
^pmdb:PM\d{7}$
The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PMDB
|
|
FAIRSharing | fairsharing |
FAIRsharing.wkaakq
|
|
Identifiers.org | miriam |
pmdb
|
|
N2T | n2t |
pmdb
|
|
Prefix Commons | prefixcommons |
pmdb
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier PM0012345
is used to demonstrate the providers
available for Protein Model Database. A guide for curating additional providers can be found
here.
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/pmdb:PM0012345 |